Insertion junction: CLIP2.009800_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.009800
Chromosome:chromosome 6
Location:7619299
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800741 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTGGGAAGACGCCCAACGGCCACTAGCCCGCTAGGTTGTGGACTACCC
Internal bar code:GGTACAGACGCGGGACGCCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1508
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TGTATGGAGTGCCGCATGTT
Suggested primer 2:GCCTGGATCGTAGAGTGACG