Insertion junction: CLIP2.009806_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.009806
Chromosome:chromosome 17
Location:5789782
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g741250 PHR1,PHR6 (1 of 1) 2.5.1.77 - 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase; 7%252C8-didemethyl-8-hydroxy-5-deazariboflavin synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGCGTATATGTGTGTGTGTGTGTATGCAGCACACGGAGAAAGACAG
Internal bar code:AATAGCAGATCTATGCGTTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1546
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGAGCGTGTGTGTTC
Suggested primer 2:CATTGCCGCACACACAGAAA