Insertion junction: CLIP2.009830_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.009830
Chromosome:chromosome 16
Location:6957062
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g672049 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGACGCACGCGCGACGGGTGGTGCCGATGCGCTGTAAGGGCGTACAGC
Internal bar code:GGCGGTCCAGAGGGCACATAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4078
LEAP-Seq percent confirming:58.4416
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:AACACCCTCGTGCGTACTTT
Suggested primer 2:CAGCTGAAGGAGTGCCTGAA