Insertion junction: CLIP2.009831_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.009831
Chromosome:chromosome 11
Location:2692750
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095071 (1 of 2) K01148 - poly(A)-specific ribonuclease (PARN) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGAAGCCTGCACCCGCACGAACAAGCAAGAAACTGTCGCTGTTAATGC
Internal bar code:ATGATCGGTCTCTAGTAGGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2222
LEAP-Seq percent confirming:68.3761
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:117

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTCGTTGTGTCCGTCCAG
Suggested primer 2:AAGCTGTTGCCTCCTGAGAC