Insertion junction: CLIP2.009835_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.009835
Chromosome:chromosome 13
Location:1019893
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g568467 intron
Cre13.g568500 (1 of 1) IPR001005//IPR009057 - SANT/Myb domain // Homeodomain-like 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCAGCATAGCAAACAGATGGTTGCCAGTGTGTTTACCTTCAGTACACG
Internal bar code:TTCAATGTTTGGGTGATCAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3621
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGTAGCTATGGGCATGG
Suggested primer 2:GTACAGAATGAAGCTGCGCG