Insertion junction: CLIP2.009838_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.009838
Chromosome:chromosome 3
Location:3908964
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170850 MMP19 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTAAAGCAGGGCATGCCACAGCCCCCACCTCTGCCCATCAAGCAGATGG
Internal bar code:ATAGCAGGATTATGCTTGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:925
LEAP-Seq percent confirming:88.4615
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTCGTACAGTCACGTGGG
Suggested primer 2:TCTGGTTGTACTCGTGCACC