Insertion junction: CLIP2.009852_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009852
Chromosome:chromosome 11
Location:4046494
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g480700 (1 of 2) IPR000104//IPR000945 - Antifreeze protein, type I // Dopamine beta-hydroxylase-related CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACCGAACCCCATCTTGCGTCGCCTTCTGCGGTGCCCTCTCCGTCTTGA
Internal bar code:GATTTTTAGCGGTGGCACACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1048
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTGTAGTGTGTGGGGAGG
Suggested primer 2:ATTTGGGACGCGTGATTCCT