Insertion junction: CLIP2.009853_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.009853
Chromosome:chromosome 12
Location:2717679
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g504900 (1 of 13) PF00646 - F-box domain (F-box) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTGTCGCCGCCGGCGCTGGGGGCGGTGGGGCCACACCTCACGCGGCT
Internal bar code:GTTTGAGTTGGCAAAGGTCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1340
LEAP-Seq percent confirming:84.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GCATCCGCATATTGCTTGCA
Suggested primer 2:TTGACCATCAAGCTTTGCGC