Insertion junction: CLIP2.009857_6

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.009857
Chromosome:chromosome 12
Location:3390498
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498000 (1 of 100) IPR001810 - F-box domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGGAGCCACCCACTCGGTTTTGCGGGGCCAAGTTTGCCAGTGCGCAG
Internal bar code:TCCATAGGTGAATGTGGTCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2601
LEAP-Seq percent confirming:92.0
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTGGAGAAGCTGGGTCTG
Suggested primer 2:CTGATGCGCATAGGGTTTGC