Insertion junction: CLIP2.009861_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.009861
Chromosome:chromosome 1
Location:4003448
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g026300 (1 of 3) PF08238 - Sel1 repeat (Sel1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATGCATTGACGGTGCCAAATCCGCCTTTTCTTATGTCCGTCGCTTTCT
Internal bar code:AGGGTCCATTGCCCACATTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2185
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCGAACATGCTTTTTGGG
Suggested primer 2:CAGTACGAGGAGCAGCAACA