Insertion junction: CLIP2.009862_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.009862
Chromosome:chromosome 9
Location:1507540
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399551 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGGTTGGAAGCAGCCGCCGCCACCAGTGCGGGGCCAAGGTGGCGTGAG
Internal bar code:TCGCTTACCACGCCGTCGGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2113
LEAP-Seq percent confirming:60.5263
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CTACCTCAAGCAGCAGCAGT
Suggested primer 2:GCTCCATCCAATCCCACCAA