Insertion junction: CLIP2.009868_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.009868
Chromosome:chromosome 16
Location:6776154
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g672350 (1 of 1) IPR001357//IPR001841 - BRCT domain // Zinc finger, RING-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGCACCACCACCGGCGGGATCGAGATGGCGCCGGGCGCATTTCCGGCC
Internal bar code:TTTCGGATGTGTGGTATTTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1227
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCATAGCACAGCTTGATGGC
Suggested primer 2:CGTACAGTAGCTAGTGCGGG