Insertion junction: CLIP2.009872_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.009872
Chromosome:chromosome 2
Location:5507072
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g114575 (1 of 20) IPR010095//IPR013083 - Transposase IS605, OrfB, C-terminal // Zinc finger, RING/FYVE/PHD-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCGTCCACGTAGACCACCAGGTGGGCGTACTTGTCCACCAGCAGACGC
Internal bar code:GATACAGGTGCTTGAGTATATA

Confirmation - LEAP-Seq

LEAP-Seq distance:5389
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGCTTGAAGAACGCAACA
Suggested primer 2:TTCAACATGCAAACAGGGCG