Insertion junction: CLIP2.009887_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.009887
Chromosome:chromosome 3
Location:201124
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144164 RSE2,RSEP2 (1 of 1) PTHR22939:SF79 - PEPTIDASE M50 FAMILY PROTEIN; Intramembrane metalloprotease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCCTCAGACGCTACGTGTAGCGGCCGACAAAGGCCTGGCGGGGCCGAT
Internal bar code:AATTGGCGTCTAAGTTCCACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:549
LEAP-Seq percent confirming:38.8889
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGTCGTCACAGGCTTCTC
Suggested primer 2:TACTTCCAAATGGCCGGTCC