Insertion junction: CLIP2.009888_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.009888
Chromosome:chromosome 13
Location:1867147
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g575400 (1 of 33) IPR013830 - SGNH hydrolase-type esterase domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTCAGAATCAGGGACTTGAAAGTGGTGTTTGGAGGAAGTCTGGCTGCA
Internal bar code:GGACGATGAGCGCTCCACCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1975
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CATTTGCTGTGTCCGCCAAA
Suggested primer 2:TCCCCGTTCCGACTCCTAAT