Insertion junction: CLIP2.009889_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.009889
Chromosome:chromosome 9
Location:5277591
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g407200 POD1 Putative all-trans-retinol 13%252C14-reductase; (1 of 3) 5.2.1.13 - Prolycopene isomerase / CRTISO CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTGCGAGCCTTCCTGGACCTGGAGGTGTGTGTGTGTGGGGGGGGGGC
Internal bar code:AGCGTCAGACTGTGTATCTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:325
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGATAGCGAGAGGGTGAC
Suggested primer 2:AGGGGCGGGAATGTTTTAGG