Insertion junction: CLIP2.009890_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.009890
Chromosome:chromosome 14
Location:1275029
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g616301 (1 of 83) IPR029044 - Nucleotide-diphospho-sugar transferases intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCCCCGTATCCTTGCTTCGGCAGTAGGGACCGCCCTAGCCGCCCCGAC
Internal bar code:AGATACGCCCACGGATAAATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:299
LEAP-Seq percent confirming:48.1481
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAGGATCTCACGAACGCC
Suggested primer 2:TCATCTCGATCACGTGCTCG