Insertion junction: CLIP2.009894_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.009894
Chromosome:chromosome 3
Location:4771984
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g177750 MAE10 (1 of 5) PTHR11206:SF94 - DNA-DAMAGE-INDUCIBLE PROTEIN F; related to EDS5, enhanced disease susceptibility gene intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGAGGAGGCGGCAGCGGCCGCGGCGGCCGGCGAGGGGCGGCGGGTGATC
Internal bar code:TAGTCCCATTGATATTCTAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:3172
LEAP-Seq percent confirming:97.9167
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:GATACCCACCCAGCTCGATG
Suggested primer 2:GGAAGTTGGGGTTCCAGAGG