Insertion junction: CLIP2.009895_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.009895
Chromosome:chromosome 17
Location:5370167
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g738250 (1 of 1) 2.5.1.31 - Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl- diphosphate specific) / UPP synthetase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGACCGGGCGGCACTGCCGGAGTCGTTACAACGAGCCATGCAGAGGTG
Internal bar code:CCTTTCCGACTGAGAAGGTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1893
LEAP-Seq percent confirming:91.25
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:CAACCGCAGTAGTCAGGAGG
Suggested primer 2:ATGAAGGGCATGTCAGGCTC