Insertion junction: CLIP2.009899_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.009899
Chromosome:chromosome 3
Location:3861467
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170400 (1 of 1) PF12579 - Protein of unknown function (DUF3755) (DUF3755) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGCGTGCTTTTGTCCACCGAATTCTGTGACGAAGTGTTTGCTACTGGT
Internal bar code:GATAGGTGTCGGGTGTTCAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1753
LEAP-Seq percent confirming:98.4375
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:ACATCACGGGGGCTTTGAAT
Suggested primer 2:GTCCCGATAGCGCATGAGAA