Insertion junction: CLIP2.009900_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.009900
Chromosome:chromosome 7
Location:3659895
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g800819 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCATGAGAGGCGCCGTCGTTCCAATTGGTGGGGGTATGGTAGATCTCG
Internal bar code:TAACGTCCTCTAGTGCATGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1626
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCCTTGCCATGTCCCAT
Suggested primer 2:AGGTACTTGTCCATGCAGGC