Insertion junction: CLIP2.009905_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.009905
Chromosome:chromosome 1
Location:3602591
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g023500 FAL2 Similar to Flagellar Associated Protein FAP234 CDS
Cre01.g023550 FAP234,TPG2 Flagellar Associated Protein 234; (1 of 1) PTHR24365//PTHR24365:SF301 - TOLL-LIKE RECEPTOR // SUBFAMILY NOT NAMED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTTGCCGCCCGCGCCTCCGCCGCCGCCACGGCTGCCCTCGCAGATGAG
Internal bar code:CGGTTGGGGGGTTCAATCTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2652
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTGAAGCTCATGGAGGCT
Suggested primer 2:GTCGCATCAGCATTGCTAGC