Insertion junction: CLIP2.009907_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.009907
Chromosome:chromosome 14
Location:613681
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g611950 PPR-superfamily protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGGTTCACATTGCATACACGGTCTTGATTTCTTCTTGTCCTTGTTGCG
Internal bar code:CATGATCTTCCCTTGACATATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3409
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GGACAAAGAGGGGACATGGG
Suggested primer 2:GCAGCTTACTATGCGCACAC