Insertion junction: CLIP2.009919_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.009919
Chromosome:chromosome 8
Location:2892037
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g374250 SAG1 (1 of 80) IPR003882 - Pistil-specific extensin-like protein; Plus agglutinin protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCTTCCGCCGACGGTAGCCAGCGGCGTGGGTGGCAGCGGCGGTGGCGT
Internal bar code:TTAAAGGAAATGTACTGCCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:225
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGTCATCGCATTGTTGG
Suggested primer 2:TATTCCTGCATGGCGCTAGG