Insertion junction: CLIP2.009931_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.009931
Chromosome:chromosome 9
Location:5676163
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g410300 (1 of 1) PF00069//PF01593//PF07714//PF08766//PF13450 - Protein kinase domain (Pkinase) // Flavin containing amine oxidoreductase (Amino_oxidase) // Protein tyrosine kinase (Pkinase_Tyr) // DEK C terminal domain (DEK_C) // NAD(P)-binding Rossmann-like domain (NAD_binding_8) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGAGCCCTCCTCCCCGCCCTCGCTCTCATCCTCATCCTCCTCGCCGCCG
Internal bar code:AGTTATAGTCCGACTGCTTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:91
LEAP-Seq percent confirming:2.94118
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGTGCATGTTTGTCTGT
Suggested primer 2:ATGAACGCCTTGTACACGGT