Insertion junction: CLIP2.009938_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.009938
Chromosome:chromosome 1
Location:5030275
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g034900 CDPK5 (1 of 4) PTHR24347:SF138 - PROTEIN F32D8.1; Calcium/calmodulin-dependent protein kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCGCGCGGCATGCATGTTGGCCACGCTGCTGGTCCGCACCTGCGCATT
Internal bar code:GTGGTTACGTGTATATTGTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1740
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTAGATACCTGACCCGCT
Suggested primer 2:TCTCCGCCACATCACTTGAC