Insertion junction: CLIP2.009940_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009940
Chromosome:chromosome 13
Location:3484486
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g587500 AOF8 (1 of 2) 1.3.5.5 - 15-cis-phytoene desaturase / Plant-type phytoene desaturase; Flavin-containing amine oxidase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTCAGGTTGAAGAAGGTGGCGCCGGCAGTGGCCTCGAAGCCCGACAGC
Internal bar code:GTGGGGGTGGCCCGTGGGAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3383
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTGCCTTCCACCTGTGTG
Suggested primer 2:AGGTATGCATCAGAGCTGGC