Insertion junction: CLIP2.009949_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.009949
Chromosome:chromosome 7
Location:2645944
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g330550 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCCGGGTGTGCCCGGACTGGACGGACGCAACGGGCCGCGCATGCAGC
Internal bar code:TTCCGCTTTCGCTAGGCCGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2547
LEAP-Seq percent confirming:95.7143
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:CCTATCGTGATGCCCCACTC
Suggested primer 2:CCAGTCAGCAACAGCAACAC