Insertion junction: CLIP2.009952_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009952
Chromosome:chromosome 3
Location:1259742
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g149800 TOG1 (1 of 1) K16803 - cytoskeleton-associated protein 5 (CKAP5, XMAP215); Microtubule associated protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCCGATTCAAAGTTCGGGGAACACGTTCCACAGAGCATACTCCGGTG
Internal bar code:TTAATGGGAGGAGGTGGTAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3473
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGGGAAGTTGCAATCGA
Suggested primer 2:GGTGGTGTAGGTGGTGATGG