Insertion junction: CLIP2.009955_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009955
Chromosome:chromosome 12
Location:9179463
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g543300 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCGGTGCGGCCGCCCACGCCGCCTAGCCCGCCGGAGCCGGAGCCGCGA
Internal bar code:GGCGCTGTGTTTTGGTGGTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3146
LEAP-Seq percent confirming:77.2727
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GATGATGACGAGTCGCCCAT
Suggested primer 2:CGAGCGGGACATTCTCATCA