Insertion junction: CLIP2.009958_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.009958
Chromosome:chromosome 3
Location:5539288
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185100 (1 of 1) K15698 - RING finger protein 121 (RNF121) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCTGGCTATCTGTACGGACCGGGCTTATGTTCATCTGGTAACGGCTC
Internal bar code:GTGGTGGGAATTGGCGATACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1866
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TCGATCCCACAGCTGACAAC
Suggested primer 2:GGCAAAACACGAGTCTGCAG