Insertion junction: CLIP2.009960_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.009960
Chromosome:chromosome 2
Location:4630425
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g107400 (1 of 31) IPR003590 - Leucine-rich repeat, ribonuclease inhibitor subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGAGGACAGCCTGCCGGCATAAACACACAGCCAGGTAATTGAAAGCCG
Internal bar code:GTTGGGCTTCGTTTCGAGCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:483
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CATCGCATGCAGTGTCTTCG
Suggested primer 2:CAGGTCCCTGCAAGAAGGTC