Insertion junction: CLIP2.009963_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.009963
Chromosome:chromosome 17
Location:6621377
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g745547 (1 of 1) PF05182 - Fip1 motif (Fip1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGCATGATGCCGGACATGCCGGGTGGCGGCATGCCCATGTGGCCGCC
Internal bar code:CTTATTCCTCGCGGAGCCGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:961
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CTGATGGGAATGGGGATGGG
Suggested primer 2:TGTCTTTCTCCTTGTCCCGC