Insertion junction: CLIP2.009969_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.009969
Chromosome:chromosome 13
Location:3851137
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g589450 FBB6L1 (1 of 1) IPR002035//IPR013694 - von Willebrand factor, type A // VIT domain; FBB6 like protein 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCGCGGGCCTGGTTGATGGGAGAGCCGTCCATGGATCCCGAGCAGTCC
Internal bar code:GTGCAGGGGCCCAGTGAGGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2200
LEAP-Seq percent confirming:77.2727
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGACCTACGTCCTCTCCT
Suggested primer 2:CTTGCTCTGGATCCAGGCAA