Insertion junction: CLIP2.009983_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009983
Chromosome:chromosome 7
Location:3309711
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g334650 (1 of 1) K10695 - E3 ubiquitin-protein ligase RNF1/2 [EC:6.3.2.19] (RNF1_2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCGCAACTGCCACCCCTTGAGCCGCTGGAGCCCGCGCCGGCGGCGACG
Internal bar code:ATTATCTAGTCCGGCGTGCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2560
LEAP-Seq percent confirming:87.1795
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTTCATCCATGTAGCCCT
Suggested primer 2:CGATGCCTTACCATTGCAGC