Insertion junction: CLIP2.009983_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.009983
Chromosome:chromosome 7
Location:3309711
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g334650 (1 of 1) K10695 - E3 ubiquitin-protein ligase RNF1/2 [EC:6.3.2.19] (RNF1_2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCAGCGGCTTACCCAGCGCCGCCTCAATCTGCCCGTAGCGCTGCGTG
Internal bar code:TTTCTAGACAAAAGATGCAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3786
LEAP-Seq percent confirming:98.6301
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:CGATGCCTTACCATTGCAGC
Suggested primer 2:CGCTTCATCCATGTAGCCCT