Insertion junction: CLIP2.009992_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009992
Chromosome:chromosome 16
Location:5969956
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g678700 (1 of 133) IPR012336 - Thioredoxin-like fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTGACAACGAATGTGTTTGACCTGCTCTACTGCCCGAAGCGGTTCAAG
Internal bar code:CCGAGTTAGTTCTCGCAGCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3676
LEAP-Seq percent confirming:90.5405
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:CTACCCCATTCAAGCTGCCA
Suggested primer 2:TAGCGCATCAGGTCCTTCAC