Insertion junction: CLIP2.009993_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.009993
Chromosome:chromosome 15
Location:1276334
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g801727 NCL66 Nuclear Control of chloroplast-Like 66; (1 of 39) PF08373 - RAP domain (RAP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTATCGGGCGCTTCGTCAGGAGCAGCGGCAGGGGAAGGCATCGCTGC
Internal bar code:ATCGGTCATGCTCTGTTAGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1414
LEAP-Seq percent confirming:61.9048
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ATCACCCATCACCCTAGCCT
Suggested primer 2:GCGAGGCAATGTACAGGAGT