Insertion junction: CLIP2.010000_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.010000
Chromosome:chromosome 1
Location:517435
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003100 (1 of 1) IPR001623//IPR011011 - DnaJ domain // Zinc finger, FYVE/PHD-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCACACACCTCTCGGCCGGGTCGGGCCGCCGCCAGCGCCGCCGCCTCGT
Internal bar code:TCACAGAAGTCGTGTTATATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2507
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GGACTGGACTTCTGCAGCTT
Suggested primer 2:GAGGACTGGTGGTTGAGACG