Insertion junction: CLIP2.010006_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.010006
Chromosome:chromosome 3
Location:7482899
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205650 (1 of 2) IPR000626//IPR009060//IPR015940//IPR029071 - Ubiquitin domain // UBA-like // Ubiquitin-associated domain // Ubiquitin-related domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAAAAGCGGTACAGGATGCACTGAAGACTGGGGGAGGGGGAGGGAACA
Internal bar code:AGAGGGTAAAAGCGCTCTTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:170
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGTGTGTGTGTGTCCA
Suggested primer 2:GACCCAATCCAACCACGCTA