Insertion junction: CLIP2.010009_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.010009
Chromosome:chromosome 12
Location:7502333
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g556700 (1 of 3) IPR000104//IPR011009 - Antifreeze protein, type I // Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTCGGCTCGGCCTCTCAACCAGCCGCGAAATGGCGAAAGCCCGCTACA
Internal bar code:CAACATGCGGCAGTGTTAAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2593
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGGCATTTGCATTATCCA
Suggested primer 2:GCCAGCAGTTTTCGGAAGTG