Insertion junction: CLIP2.010014_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010014
Chromosome:chromosome 1
Location:537463
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003300 (1 of 2) PTHR30483 - LEUCINE-SPECIFIC-BINDING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACGGACGAGGAGGAGCTGAGAACGGCGGCAGCAGCAAGAGGCGCCGCC
Internal bar code:AAAGGGGGAGAGTAGTATCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:413
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAAGCTCCCCATTGTCAT
Suggested primer 2:GCAATGATGTCGCCGTTCTC