Insertion junction: CLIP2.010014_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.010014
Chromosome:chromosome 1
Location:537469
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003300 (1 of 2) PTHR30483 - LEUCINE-SPECIFIC-BINDING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCCCATCATCCTGCCCGTGCCTGCCTGCCCACCACGCACCCTCAAAAC
Internal bar code:AAAGGGGGAGAGTAGTATCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2028
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GCAATGATGTCGCCGTTCTC
Suggested primer 2:CCCAAGCTCCCCATTGTCAT