Insertion junction: CLIP2.010016_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.010016
Chromosome:chromosome 13
Location:1917133
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g575950 HIRA1,HIR1 (1 of 1) K11293 - protein HIRA/HIR1 (HIRA, HIR1); Histone transcription regulator intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAAAGCAACACGCAAATCGCCACACAGGCGGTGCTGGAGCACAACCTGG
Internal bar code:TCGTGCTGACTGTGTCCAGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2572
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CCCATTTCTTCCCCTCCCAC
Suggested primer 2:GCGCATGCAGTTACCGTATG