Insertion junction: CLIP2.010021_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.010021
Chromosome:chromosome 10
Location:1118620
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g425450 AOF5 (1 of 1) 1.5.99.4 - Nicotine dehydrogenase; Flavin-containing amine oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAAGCATGGAGCGGGGCCGTGTGTGCCGTACGCGTGTCGTGTGTCAAGG
Internal bar code:TGCTGCGTACTGTGGGCCTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:117
LEAP-Seq percent confirming:3.57143
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAGTCTCGCACCTTTGAC
Suggested primer 2:GCCAAAGACACAATGCTGCA