Insertion junction: CLIP2.010027_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010027
Chromosome:chromosome 7
Location:6136904
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g355800 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATCGCCTGCGCCAGCCAGATTGGCCCGGCGCACACCCGCCAGTGCTGA
Internal bar code:ACTTTTTGGACACTTAAGATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1995
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TACCTCCAGTACGAGTGGGG
Suggested primer 2:GACTCAGTGAACACCGACGT