Insertion junction: CLIP2.010041_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.010041
Chromosome:chromosome 6
Location:6705900
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g295200 pCRY,PCRY1,CPH1 Plant-like Cryptochrome photoreceptor; (1 of 1) PTHR11455//PTHR11455:SF18 - CRYPTOCHROME // DEOXYRIBODIPYRIMIDINE PHOTO-LYASE, MITOCHONDRIAL 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAATAACCCAGTGTGCAACAAGAAGTCGAAGGCGTCTCAGTACCTAG
Internal bar code:CTATCCAGTAATTCTGTAGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2361
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCACATGTGCTGGAGTGG
Suggested primer 2:CGTAAATGGCCATGCGGAAG