Insertion junction: CLIP2.010041_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.010041
Chromosome:chromosome 6
Location:6705905
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g295200 pCRY,PCRY1,CPH1 Plant-like Cryptochrome photoreceptor; (1 of 1) PTHR11455//PTHR11455:SF18 - CRYPTOCHROME // DEOXYRIBODIPYRIMIDINE PHOTO-LYASE, MITOCHONDRIAL 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAACACGAGAGACGACACAATCGCGCCCGACGCCATAGGTCGCAGCCA
Internal bar code:CGCAGGGGTTCCCCACGAAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2843
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CGTAAATGGCCATGCGGAAG
Suggested primer 2:ACTCACATGTGCTGGAGTGG