Insertion junction: CLIP2.010042_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.010042
Chromosome:chromosome 12
Location:5333844
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g528614 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCGTTAGTGCTGCCGCCATTGGTCCCGTCAGGCCGAATGGCTGACGC
Internal bar code:AAGAATTTGTGGTTGAAATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3112
LEAP-Seq percent confirming:84.0708
LEAP-Seq n confirming:95
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:113

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTTGCAGGCTCCTTTGTA
Suggested primer 2:ACTTTATCACCCGCGCTTGA