Insertion junction: CLIP2.010047_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.010047
Chromosome:chromosome 11
Location:222260
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467554 (1 of 15) PF01694 - Rhomboid family (Rhomboid) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGGGTGTCTCGCTTGGCTAGTCTGCTATAGGGGTAGGTCAGGAGGCA
Internal bar code:CCAACTGGTGTTCGTTTCCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1807
LEAP-Seq percent confirming:97.6471
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCCCTTCACGACGGAGAT
Suggested primer 2:ACACATGGACGCAAAGCCTA